STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH85537.1Predicted metal-dependent hydrolase, TIM-barrel fold. (356 aa)    
Predicted Functional Partners:
SDH85507.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
 
  
  0.963
SDI09209.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
 
  
  0.740
SDH83821.1
Glyoxalase family protein.
    
 0.733
SDH85484.1
Thioredoxin reductase (NADPH).
       0.714
SDH85451.1
Aldehyde dehydrogenase (acceptor).
  
 
  0.680
SDH92494.1
Putative hydrolase of the HAD superfamily.
  
    0.502
SDH98505.1
Lactoylglutathione lyase.
  
  
 0.498
SDH92887.1
Hypothetical protein.
  
     0.455
hmp
Nitric oxide dioxygenase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
 
  
  0.437
SDH39487.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Alteribacillus persepolensis
NCBI taxonomy Id: 568899
Other names: A. persepolensis, Alteribacillus persepolensis (Amoozegar et al. 2009) Didari et al. 2012, Bacillus persepolensis, Bacillus persepolensis Amoozegar et al. 2009, Bacillus sp. HS 136, CCM 7595, DSM 21632, JCM 15720, LMG 25222, LMG:25222, strain HS136
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