Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG97745.1 | SDH92870.1 | SAMN05192534_101208 | SAMN05192534_11561 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | DNA polymerase. | 0.619 |
SDH18362.1 | SDH92870.1 | SAMN05192534_10299 | SAMN05192534_11561 | Single-strand DNA-binding protein. | DNA polymerase. | 0.555 |
SDH18362.1 | ndk | SAMN05192534_10299 | SAMN05192534_101532 | Single-strand DNA-binding protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.423 |
SDH35185.1 | SDH92870.1 | SAMN05192534_104122 | SAMN05192534_11561 | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | DNA polymerase. | 0.494 |
SDH35185.1 | ndk | SAMN05192534_104122 | SAMN05192534_101532 | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.744 |
SDH85597.1 | SDH92870.1 | SAMN05192534_11319 | SAMN05192534_11561 | General stress protein 26. | DNA polymerase. | 0.479 |
SDH86182.1 | SDH92870.1 | SAMN05192534_11340 | SAMN05192534_11561 | Oxaloacetate decarboxylase, alpha subunit. | DNA polymerase. | 0.530 |
SDH92870.1 | SDG97745.1 | SAMN05192534_11561 | SAMN05192534_101208 | DNA polymerase. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.619 |
SDH92870.1 | SDH18362.1 | SAMN05192534_11561 | SAMN05192534_10299 | DNA polymerase. | Single-strand DNA-binding protein. | 0.555 |
SDH92870.1 | SDH35185.1 | SAMN05192534_11561 | SAMN05192534_104122 | DNA polymerase. | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.494 |
SDH92870.1 | SDH85597.1 | SAMN05192534_11561 | SAMN05192534_11319 | DNA polymerase. | General stress protein 26. | 0.479 |
SDH92870.1 | SDH86182.1 | SAMN05192534_11561 | SAMN05192534_11340 | DNA polymerase. | Oxaloacetate decarboxylase, alpha subunit. | 0.530 |
SDH92870.1 | SDI15260.1 | SAMN05192534_11561 | SAMN05192534_12342 | DNA polymerase. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.555 |
SDH92870.1 | SDI26437.1 | SAMN05192534_11561 | SAMN05192534_12924 | DNA polymerase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.579 |
SDH92870.1 | SDI39744.1 | SAMN05192534_11561 | SAMN05192534_1437 | DNA polymerase. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.555 |
SDH92870.1 | ndk | SAMN05192534_11561 | SAMN05192534_101532 | DNA polymerase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.463 |
SDH92870.1 | ung | SAMN05192534_11561 | SAMN05192534_11467 | DNA polymerase. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.671 |
SDI15260.1 | SDH92870.1 | SAMN05192534_12342 | SAMN05192534_11561 | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | DNA polymerase. | 0.555 |
SDI15260.1 | ndk | SAMN05192534_12342 | SAMN05192534_101532 | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.423 |
SDI26437.1 | SDH92870.1 | SAMN05192534_12924 | SAMN05192534_11561 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | DNA polymerase. | 0.579 |
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