Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG94047.1 | SDH00416.1 | SAMN05192534_10182 | SAMN05192534_101288 | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | 0.882 |
SDG94047.1 | SDH93323.1 | SAMN05192534_10182 | SAMN05192534_11579 | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | Ferredoxin. | 0.447 |
SDH00298.1 | SDH00328.1 | SAMN05192534_101284 | SAMN05192534_101285 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | 0.999 |
SDH00298.1 | SDH00416.1 | SAMN05192534_101284 | SAMN05192534_101288 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | 0.452 |
SDH00298.1 | SDH31491.1 | SAMN05192534_101284 | SAMN05192534_10418 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | acetyl-CoA synthetase. | 0.857 |
SDH00298.1 | SDH93323.1 | SAMN05192534_101284 | SAMN05192534_11579 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Ferredoxin. | 0.804 |
SDH00328.1 | SDH00298.1 | SAMN05192534_101285 | SAMN05192534_101284 | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.999 |
SDH00328.1 | SDH31491.1 | SAMN05192534_101285 | SAMN05192534_10418 | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | acetyl-CoA synthetase. | 0.436 |
SDH00328.1 | SDH93323.1 | SAMN05192534_101285 | SAMN05192534_11579 | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | Ferredoxin. | 0.426 |
SDH00416.1 | SDG94047.1 | SAMN05192534_101288 | SAMN05192534_10182 | Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | 0.882 |
SDH00416.1 | SDH00298.1 | SAMN05192534_101288 | SAMN05192534_101284 | Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.452 |
SDH00416.1 | SDH07050.1 | SAMN05192534_101288 | SAMN05192534_101512 | Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | Uncharacterized membrane protein YpjA. | 0.650 |
SDH00416.1 | SDH93323.1 | SAMN05192534_101288 | SAMN05192534_11579 | Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | Ferredoxin. | 0.434 |
SDH07050.1 | SDH00416.1 | SAMN05192534_101512 | SAMN05192534_101288 | Uncharacterized membrane protein YpjA. | Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family. | 0.650 |
SDH07050.1 | SDH31491.1 | SAMN05192534_101512 | SAMN05192534_10418 | Uncharacterized membrane protein YpjA. | acetyl-CoA synthetase. | 0.446 |
SDH07050.1 | SDH93323.1 | SAMN05192534_101512 | SAMN05192534_11579 | Uncharacterized membrane protein YpjA. | Ferredoxin. | 0.423 |
SDH31491.1 | SDH00298.1 | SAMN05192534_10418 | SAMN05192534_101284 | acetyl-CoA synthetase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.857 |
SDH31491.1 | SDH00328.1 | SAMN05192534_10418 | SAMN05192534_101285 | acetyl-CoA synthetase. | 2-oxoglutarate ferredoxin oxidoreductase subunit beta. | 0.436 |
SDH31491.1 | SDH07050.1 | SAMN05192534_10418 | SAMN05192534_101512 | acetyl-CoA synthetase. | Uncharacterized membrane protein YpjA. | 0.446 |
SDH31491.1 | SDH93323.1 | SAMN05192534_10418 | SAMN05192534_11579 | acetyl-CoA synthetase. | Ferredoxin. | 0.435 |
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