STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANC42322.1CFA/I fimbrial subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology. (854 aa)    
Predicted Functional Partners:
ANC42321.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.898
rpmE2
50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.820
ANC42320.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
ANC42323.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.765
ANC42319.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.761
ANC42122.1
Riboflavin synthase subunit alpha; Catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.698
ANC39338.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.692
ANC41337.1
PTS ascorbate transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.692
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
   
    0.626
ANC40173.1
Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.626
Your Current Organism:
Hafnia alvei
NCBI taxonomy Id: 569
Other names: ATCC 13337, CCUG 41547, CIP 57.31, DSM 30163, Enterobacter aerogenes subsp. hafniae, Enterobacter alvei, Enterobacter hafniae, H. alvei, Hafnia alvei sensu stricto genomosp. 1, LMG 10392, LMG:10392, NCDC 434-68, NCTC 8105, NRRL B-4260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.