STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_12428OBG-type G domain-containing protein. (416 aa)    
Predicted Functional Partners:
PV07_08440
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.770
PV07_06832
Zn(2)-C6 fungal-type domain-containing protein.
  
  
 0.709
PV07_07369
Uncharacterized protein.
  
  
 0.709
PV07_03026
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
     
 0.687
PV07_06682
Uncharacterized protein.
   
   0.674
PV07_07566
RF_PROK_I domain-containing protein.
  
  
 0.673
PV07_10581
Ribosomal_S7 domain-containing protein.
  
 
 0.638
PV07_03850
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.638
PV07_01343
Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.618
PV07_12446
Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.618
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.