Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV07_00972 | PV07_03264 | A0A0D2B987 | A0A0D2B1Y0 | Rhomboid domain-containing protein. | PHB domain-containing protein. | 0.802 |
PV07_00972 | PV07_09051 | A0A0D2B987 | A0A0D1ZDW1 | Rhomboid domain-containing protein. | AAA domain-containing protein. | 0.823 |
PV07_00972 | PV07_09878 | A0A0D2B987 | A0A0D1Z919 | Rhomboid domain-containing protein. | PHB domain-containing protein. | 0.661 |
PV07_00972 | PV07_10489 | A0A0D2B987 | A0A0D2C0C9 | Rhomboid domain-containing protein. | Prohibitin. | 0.799 |
PV07_00972 | PV07_12143 | A0A0D2B987 | A0A0D2ABS4 | Rhomboid domain-containing protein. | Prohibitin. | 0.693 |
PV07_03264 | PV07_00972 | A0A0D2B1Y0 | A0A0D2B987 | PHB domain-containing protein. | Rhomboid domain-containing protein. | 0.802 |
PV07_03264 | PV07_04811 | A0A0D2B1Y0 | A0A0D2CFH3 | PHB domain-containing protein. | ATP-dependent Clp protease, ATP-binding subunit ClpX. | 0.429 |
PV07_03264 | PV07_04966 | A0A0D2B1Y0 | A0A0D2D004 | PHB domain-containing protein. | Rhomboid domain-containing protein. | 0.762 |
PV07_03264 | PV07_07824 | A0A0D2B1Y0 | A0A0D2ASM2 | PHB domain-containing protein. | Uncharacterized protein. | 0.417 |
PV07_03264 | PV07_09051 | A0A0D2B1Y0 | A0A0D1ZDW1 | PHB domain-containing protein. | AAA domain-containing protein. | 0.890 |
PV07_03264 | PV07_10489 | A0A0D2B1Y0 | A0A0D2C0C9 | PHB domain-containing protein. | Prohibitin. | 0.771 |
PV07_03264 | PV07_11678 | A0A0D2B1Y0 | A0A0D2BYT8 | PHB domain-containing protein. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.529 |
PV07_03264 | PV07_12143 | A0A0D2B1Y0 | A0A0D2ABS4 | PHB domain-containing protein. | Prohibitin. | 0.843 |
PV07_04811 | PV07_03264 | A0A0D2CFH3 | A0A0D2B1Y0 | ATP-dependent Clp protease, ATP-binding subunit ClpX. | PHB domain-containing protein. | 0.429 |
PV07_04811 | PV07_09051 | A0A0D2CFH3 | A0A0D1ZDW1 | ATP-dependent Clp protease, ATP-binding subunit ClpX. | AAA domain-containing protein. | 0.740 |
PV07_04811 | PV07_09878 | A0A0D2CFH3 | A0A0D1Z919 | ATP-dependent Clp protease, ATP-binding subunit ClpX. | PHB domain-containing protein. | 0.429 |
PV07_04811 | PV07_10489 | A0A0D2CFH3 | A0A0D2C0C9 | ATP-dependent Clp protease, ATP-binding subunit ClpX. | Prohibitin. | 0.543 |
PV07_04811 | PV07_11678 | A0A0D2CFH3 | A0A0D2BYT8 | ATP-dependent Clp protease, ATP-binding subunit ClpX. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.560 |
PV07_04811 | PV07_12143 | A0A0D2CFH3 | A0A0D2ABS4 | ATP-dependent Clp protease, ATP-binding subunit ClpX. | Prohibitin. | 0.576 |
PV07_04966 | PV07_03264 | A0A0D2D004 | A0A0D2B1Y0 | Rhomboid domain-containing protein. | PHB domain-containing protein. | 0.762 |
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