Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PV07_06889HET domain-containing protein. (691 aa)    
Predicted Functional Partners:
PV07_02121
Uncharacterized protein.
    
 0.747
PV07_04911
Nucleoside diphosphate kinase.
   
  0.610
PV07_11916
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.597
PV07_07444
Zn(2)-C6 fungal-type domain-containing protein.
  
 
  0.579
PV07_02253
Zn(2)-C6 fungal-type domain-containing protein.
  
 
  0.574
PV07_08276
Protein kinase domain-containing protein.
  
 
  0.565
PV07_00945
HET domain-containing protein.
  
 
  0.554
PV07_04175
Uncharacterized protein.
    
 
 0.527
PV07_09629
Zn(2)-C6 fungal-type domain-containing protein.
  
 
  0.524
PV07_05783
Uncharacterized protein.
  
 
   0.504
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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