STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_03029Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (450 aa)    
Predicted Functional Partners:
PV07_04050
60S ribosomal protein L7.
  
 
 0.906
PV07_03693
60S ribosomal protein L35.
  
 
 0.899
PV07_12369
60S ribosomal protein L5.
  
 
 0.896
PV07_10783
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.886
PV07_00910
Ribosomal protein L24.
  
   0.884
PV07_07059
Ribosomal_L23eN domain-containing protein.
  
 
 0.882
PV07_08324
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
   0.868
PV07_11481
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.856
PV07_09914
Uncharacterized protein.
  
   0.853
PV07_01283
60S ribosomal protein L23-B; Belongs to the universal ribosomal protein uL14 family.
  
   0.837
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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