STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_01753Glycolate oxidase, subunit GlcD. (604 aa)    
Predicted Functional Partners:
PV07_04459
Uncharacterized protein.
   
 0.811
PV07_06615
Uncharacterized protein.
   
 0.769
PV07_08022
Uncharacterized protein; Belongs to the cytochrome b5 family.
   
 0.760
PV07_05337
FAD-binding PCMH-type domain-containing protein.
  
  
 
0.725
PV07_10155
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.722
PV07_06321
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.717
PV07_09530
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 
  0.684
PV07_04682
Uncharacterized protein; Belongs to the cytochrome b5 family.
   
 0.683
PV07_06355
Uncharacterized protein.
   
 0.683
PV07_06578
FMN hydroxy acid dehydrogenase domain-containing protein.
   
 0.683
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.