STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_12823Uncharacterized protein. (296 aa)    
Predicted Functional Partners:
PV07_09724
Uncharacterized protein.
    
 0.799
PV07_05332
Uncharacterized protein.
    
 0.799
PV07_08909
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.747
PV07_12855
Uncharacterized protein.
 
     0.650
PV07_05465
Uncharacterized protein.
    
  0.516
PV07_03663
Uncharacterized protein.
    
  0.491
PV07_09914
Uncharacterized protein.
    
  0.484
PV07_06683
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.478
PV07_08120
Ribosomal protein S2.
    
  0.477
PV07_00020
Ribosomal protein S6.
    
  0.477
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.