STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_12318WD_REPEATS_REGION domain-containing protein. (473 aa)    
Predicted Functional Partners:
PV07_07528
HORMA domain-containing protein.
   
 0.974
PV07_02309
Uncharacterized protein.
   
 0.972
PV07_11193
Serine/threonine-protein kinase.
   
 0.963
PV07_02714
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.959
PV07_00463
WD_REPEATS_REGION domain-containing protein.
   
 0.957
PV07_05382
TPR_REGION domain-containing protein.
   
 0.955
PV07_03559
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.954
PV07_00704
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.954
PV07_05004
Uncharacterized protein.
   
 0.953
PV07_02780
Uncharacterized protein.
    
 0.952
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.