PV07_11556 protein (Cladophialophora immunda)

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Score

PV07_11556

NTP_transf_9 domain-containing protein. (163 aa)

Predicted Functional Partners:

PV07_06975

0.953

PV07_00296

0.952

PV07_05505

0.914

PV07_07999

0.913

PV07_00249

0.897

PV07_07350

0.897

LSM4

0.868

LSM3

0.849

PV07_12153

0.833

LSM1

0.833

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	LSM3	A0A0D2BUY9	A0A0D2DDA7	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.980
LSM1	LSM4	A0A0D2BUY9	A0A0D2CFR9	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.979
LSM1	PV07_00249	A0A0D2BUY9	A0A0D1ZZ33	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	YjeF family domain-containing protein.	0.746
LSM1	PV07_00296	A0A0D2BUY9	A0A0D2CQG4	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	PAT1 domain-containing protein.	0.976
LSM1	PV07_05505	A0A0D2BUY9	A0A0D2CHQ5	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.930
LSM1	PV07_06975	A0A0D2BUY9	A0A0D1ZGZ4	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.832
LSM1	PV07_07350	A0A0D2BUY9	A0A0D2CB20	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.	0.746
LSM1	PV07_07999	A0A0D2BUY9	A0A0D1ZJZ9	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.	0.976
LSM1	PV07_11556	A0A0D2BUY9	A0A0D2BW97	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	NTP_transf_9 domain-containing protein.	0.833
LSM3	LSM1	A0A0D2DDA7	A0A0D2BUY9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.980
LSM3	LSM4	A0A0D2DDA7	A0A0D2CFR9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM3	PV07_00249	A0A0D2DDA7	A0A0D1ZZ33	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	YjeF family domain-containing protein.	0.819
LSM3	PV07_00296	A0A0D2DDA7	A0A0D2CQG4	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	PAT1 domain-containing protein.	0.999
LSM3	PV07_05505	A0A0D2DDA7	A0A0D2CHQ5	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.970
LSM3	PV07_06975	A0A0D2DDA7	A0A0D1ZGZ4	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.842
LSM3	PV07_07350	A0A0D2DDA7	A0A0D2CB20	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.	0.819
LSM3	PV07_07999	A0A0D2DDA7	A0A0D1ZJZ9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.	0.913
LSM3	PV07_11556	A0A0D2DDA7	A0A0D2BW97	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	NTP_transf_9 domain-containing protein.	0.849
LSM3	PV07_12153	A0A0D2DDA7	A0A0D2ABT2	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.980
LSM4	LSM1	A0A0D2CFR9	A0A0D2BUY9	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.979