STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_10252Uncharacterized protein. (1341 aa)    
Predicted Functional Partners:
PV07_05791
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.805
PV07_08129
J domain-containing protein.
   
   0.682
PV07_06682
Uncharacterized protein.
   
   0.675
PV07_07999
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.
   
 
 0.627
PV07_00493
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.596
PV07_09654
Uncharacterized protein.
   
   0.584
PV07_10339
Uncharacterized protein.
   
   0.549
PV07_06986
ThiF domain-containing protein.
    
 
 0.531
PV07_04178
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.512
PV07_07246
Protein transporter SEC61 subunit alpha; Belongs to the SecY/SEC61-alpha family.
   
    0.506
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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