STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_10588Uncharacterized protein. (1034 aa)    
Predicted Functional Partners:
PV07_01115
DNA_mis_repair domain-containing protein.
  
 
0.999
PV07_07679
DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.996
PV07_05483
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.990
PV07_07540
Uncharacterized protein.
   
 0.973
PV07_04568
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.950
PV07_11238
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
 0.932
PV07_05865
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.926
PV07_01356
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.911
PV07_05892
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.892
PV07_08541
Vezatin domain-containing protein.
   
 0.869
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.