STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_07246Protein transporter SEC61 subunit alpha; Belongs to the SecY/SEC61-alpha family. (476 aa)    
Predicted Functional Partners:
PV07_01490
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.998
PV07_00910
Ribosomal protein L24.
  
 
 0.998
PV07_10304
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]
   
 0.997
PV07_07059
Ribosomal_L23eN domain-containing protein.
  
 
 0.997
PV07_03693
60S ribosomal protein L35.
  
 
 0.997
PV07_12369
60S ribosomal protein L5.
  
 
 0.996
PV07_11481
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.996
PV07_05940
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.996
PV07_09914
Uncharacterized protein.
  
 
 0.996
PV07_04050
60S ribosomal protein L7.
  
 
 0.996
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.