STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_08336Uncharacterized protein. (1152 aa)    
Predicted Functional Partners:
PV07_01251
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.946
PV07_04213
Uncharacterized protein.
    
 0.945
PV07_07997
SMC_N domain-containing protein.
    
 0.937
PV07_11077
SMC_N domain-containing protein.
    
 0.935
PV07_08434
SP-RING-type domain-containing protein.
    
 0.933
PV07_08441
Structural maintenance of chromosomes protein.
    
 0.794
PV07_11892
BTB domain-containing protein.
    
 0.710
PV07_06626
Structural maintenance of chromosomes protein.
    
 0.710
PV07_06521
Uncharacterized protein.
    
 0.710
PV07_07525
Structural maintenance of chromosomes protein.
    
 0.706
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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