STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_05031NmrA domain-containing protein. (353 aa)    
Predicted Functional Partners:
PV07_06871
GATA-type domain-containing protein.
    
 
 0.908
PV07_00560
Uncharacterized protein.
    
 
 0.633
PV07_04865
Uncharacterized protein.
    
 
 0.585
PV07_04186
Goodbye domain-containing protein.
    
 
 0.585
PV07_01587
Uncharacterized protein.
    
 
 0.585
PV07_08971
Protein GZF3.
    
 
 0.585
PV07_06921
Uncharacterized protein.
    
 
 0.585
PV07_05919
GATA-type domain-containing protein.
    
 
 0.585
PV07_10138
GATA-type domain-containing protein.
    
 
 0.585
PV07_08909
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
      
 0.513
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.