Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV07_00755 | PV07_01488 | A0A0D2DE32 | A0A0D2CXU2 | CBF domain-containing protein. | rRNA 2'-O-methyltransferase fibrillarin. | 0.871 |
PV07_00755 | PV07_01542 | A0A0D2DE32 | A0A0D2A3C0 | CBF domain-containing protein. | CP-type G domain-containing protein. | 0.931 |
PV07_00755 | PV07_04604 | A0A0D2DE32 | A0A0D2B6B3 | CBF domain-containing protein. | Nop domain-containing protein. | 0.899 |
PV07_00755 | PV07_05819 | A0A0D2DE32 | A0A0D2CIY4 | CBF domain-containing protein. | Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.982 |
PV07_00755 | PV07_07173 | A0A0D2DE32 | A0A0D2AQS1 | CBF domain-containing protein. | Centromere/microtubule-binding protein cbf5. | 0.912 |
PV07_00755 | PV07_11860 | A0A0D2DE32 | A0A0D2BZD2 | CBF domain-containing protein. | Brix domain-containing protein. | 0.957 |
PV07_00755 | PV07_11888 | A0A0D2DE32 | A0A0D2CJG6 | CBF domain-containing protein. | Nop domain-containing protein. | 0.932 |
PV07_00755 | PV07_12212 | A0A0D2DE32 | A0A0D2ABY3 | CBF domain-containing protein. | Uncharacterized protein. | 0.958 |
PV07_00755 | PV07_12321 | A0A0D2DE32 | A0A0D1Z487 | CBF domain-containing protein. | Utp12 domain-containing protein. | 0.893 |
PV07_00755 | PV07_12348 | A0A0D2DE32 | A0A0D2CG11 | CBF domain-containing protein. | LisH domain-containing protein. | 0.897 |
PV07_01488 | PV07_00755 | A0A0D2CXU2 | A0A0D2DE32 | rRNA 2'-O-methyltransferase fibrillarin. | CBF domain-containing protein. | 0.871 |
PV07_01488 | PV07_01542 | A0A0D2CXU2 | A0A0D2A3C0 | rRNA 2'-O-methyltransferase fibrillarin. | CP-type G domain-containing protein. | 0.899 |
PV07_01488 | PV07_04604 | A0A0D2CXU2 | A0A0D2B6B3 | rRNA 2'-O-methyltransferase fibrillarin. | Nop domain-containing protein. | 0.999 |
PV07_01488 | PV07_05819 | A0A0D2CXU2 | A0A0D2CIY4 | rRNA 2'-O-methyltransferase fibrillarin. | Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.981 |
PV07_01488 | PV07_07173 | A0A0D2CXU2 | A0A0D2AQS1 | rRNA 2'-O-methyltransferase fibrillarin. | Centromere/microtubule-binding protein cbf5. | 0.996 |
PV07_01488 | PV07_11860 | A0A0D2CXU2 | A0A0D2BZD2 | rRNA 2'-O-methyltransferase fibrillarin. | Brix domain-containing protein. | 0.725 |
PV07_01488 | PV07_11888 | A0A0D2CXU2 | A0A0D2CJG6 | rRNA 2'-O-methyltransferase fibrillarin. | Nop domain-containing protein. | 0.999 |
PV07_01488 | PV07_12212 | A0A0D2CXU2 | A0A0D2ABY3 | rRNA 2'-O-methyltransferase fibrillarin. | Uncharacterized protein. | 0.981 |
PV07_01488 | PV07_12321 | A0A0D2CXU2 | A0A0D1Z487 | rRNA 2'-O-methyltransferase fibrillarin. | Utp12 domain-containing protein. | 0.996 |
PV07_01488 | PV07_12348 | A0A0D2CXU2 | A0A0D2CG11 | rRNA 2'-O-methyltransferase fibrillarin. | LisH domain-containing protein. | 0.968 |
page 1 of 6