STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_05967Uncharacterized protein. (579 aa)    
Predicted Functional Partners:
PV07_01882
Tryptophan synthase.
    
  0.766
PV07_05512
Uncharacterized protein.
    
 0.563
PV07_12199
Glutamate-cysteine ligase.
    
 0.563
PV07_05690
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
  
 
  0.558
PV07_10976
MR_MLE domain-containing protein.
     
 0.556
PV07_03373
Aminotran_5 domain-containing protein.
   
 
 0.542
PV07_01279
MR_MLE domain-containing protein.
   
 
 0.535
PV07_08497
Aspartate aminotransferase.
   
 
 0.522
PV07_06443
Malate synthase; Belongs to the malate synthase family.
   
 
 0.493
PV07_07986
Isocitrate lyase.
   
 
  0.481
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.