STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_09787Uncharacterized protein. (855 aa)    
Predicted Functional Partners:
PV07_10987
Uncharacterized protein.
     
 0.661
PV07_04544
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
   
 
  0.637
PV07_03526
E3 ubiquitin-protein ligase.
    
 0.633
PV07_09707
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.618
PV07_06836
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.608
PV07_10256
VWFA domain-containing protein.
    
 0.596
PV07_06032
Uncharacterized protein.
    
 0.596
PV07_09822
NodB homology domain-containing protein.
    
 0.596
PV07_07377
NodB homology domain-containing protein.
    
 0.596
PV07_11214
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
     
 0.575
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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