STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_04199PNPLA domain-containing protein. (556 aa)    
Predicted Functional Partners:
PV07_04300
Lipase_3 domain-containing protein.
    
  0.929
PV07_09138
Uncharacterized protein.
    
 0.859
PV07_03485
Uncharacterized protein.
    
 0.796
PV07_01532
PNPLA domain-containing protein.
  
0.790
PV07_09315
Uncharacterized protein.
    
 0.790
PV07_02797
Uncharacterized protein.
    
 0.786
PV07_08356
Uncharacterized protein.
     
 0.764
PV07_00804
Uncharacterized protein.
    
 0.759
PV07_12287
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.746
PV07_01334
LNS2 domain-containing protein.
     
 0.731
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.