STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_05258Uncharacterized protein. (1030 aa)    
Predicted Functional Partners:
PV07_12255
Rab-GAP TBC domain-containing protein.
    
 0.973
PV07_01139
Septum-promoting GTP-binding protein 1.
    
 0.951
PV07_00962
Rab-GAP TBC domain-containing protein.
  
 
 0.926
PV07_11193
Serine/threonine-protein kinase.
    
 0.863
PV07_01154
Uncharacterized protein.
    
 
 0.654
PV07_11112
Uncharacterized protein.
   
 
 0.558
PV07_03535
Protein kinase domain-containing protein.
    
 
 0.552
PV07_01489
LRRcap domain-containing protein.
    
 
 0.484
PV07_08545
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.457
PV07_06564
Uncharacterized protein.
    
 0.457
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.