STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV07_06310WW domain-containing protein. (1187 aa)    
Predicted Functional Partners:
PV07_01601
RanBD1 domain-containing protein.
    
 0.729
PV07_02482
WD_REPEATS_REGION domain-containing protein.
    
 0.672
PV07_03862
Uncharacterized protein.
    
 0.668
PV07_03197
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.632
PV07_03940
Uncharacterized protein.
    
 0.629
PV07_06922
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.604
PV07_09445
Protein kinase domain-containing protein.
    
 0.597
PV07_05635
UBA domain-containing protein.
    
 0.597
PV07_02914
WD_REPEATS_REGION domain-containing protein.
    
  0.581
PV07_04512
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.566
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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