STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD08307.1NAD binding domain of 6-phosphogluconate dehydrogenase. (261 aa)    
Predicted Functional Partners:
APD08308.1
Ribonuclease activity regulator protein RraA.
     0.977
APD08312.1
Metapyrocatechase (catechol 2,3-dioxygenase).
 
  
 0.955
APD08309.1
LmbE-like protein.
 
     0.946
APD08310.1
Hypothetical protein.
 
     0.943
APD08311.1
GntR family transcriptional regulator.
 
    0.814
pobA
P-hydroxybenzoate hydroxylase.
  
   
 0.703
lly
4-hydroxyphenylpyruvate dioxygenase.
 
     0.666
APD08313.1
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.643
APD08327.1
Metapyrocatechase (catechol 2,3-dioxygenase).
 
  
 0.643
APD08314.1
Branched-chain amino acid ABC transporter substrate-binding protein.
 
     0.628
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
Server load: low (18%) [HD]