STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD08330.1Large integral membrane transport protein. (434 aa)    
Predicted Functional Partners:
APD08334.1
Tripartite tricarboxylate transporter TctA family protein.
 
  
  0.959
APD08329.1
Tripartite ATP-independent periplasmic transporter, DctQ component.
  
 
 0.910
APD08328.1
ABC transporter substrate-binding protein.
 
  
 0.905
APD09358.1
Tripartite transporter small subunit.
    0.858
APD08279.1
Putative C4-dicarboxylate transporter, periplasmic C4-dicarboxylate-binding protein.
 
  
 0.822
APD08280.1
Putative C4-dicarboxylate transporter, small permease protein.
 
 
 0.804
pobA
P-hydroxybenzoate hydroxylase.
   
   0.789
lly
4-hydroxyphenylpyruvate dioxygenase.
       0.584
APD08332.1
Tripartite tricarboxylate transporter family receptor.
 
     0.583
tdh_1
L-threonine 3-dehydrogenase.
     
 0.536
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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