STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD08342.1phenylacetyl-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (444 aa)    
Predicted Functional Partners:
APD08343.1
Phenylacetic acid degradation protein PaaI.
 
 
 0.989
APD08287.1
Phenylacetic acid degradation protein PaaC.
 
 
 0.932
paaA
phenylacetate-CoA oxygenase subunit PaaA.
 
 
 0.932
APD08288.1
Phenylacetic acid degradation protein PaaB.
  
 
 0.921
APD08286.1
Phenylacetic acid degradation protein PaaD.
 
  
 0.918
APD08347.1
Branched-chain amino acid ABC transporter substrate-binding protein.
 
    0.836
livH
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
    0.820
APD08345.1
Branched-chain amino acid ABC transporter ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.817
APD08344.1
Branched-chain amino acid ABC transporter ATP-binding protein.
 
    0.816
flK
Fluoroacetyl-CoA thioesterase.
       0.787
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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