STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD08499.1DsrE/DsrF-like family protein. (128 aa)    
Predicted Functional Partners:
APD08833.1
Sulfur oxidation protein SoxZ.
 
    0.791
APD08834.1
Sulfur oxidation protein SoxY.
 
    0.790
APD08830.1
Cytochrome C SoxX.
 
     0.771
APD08832.1
Cytochrome C.
 
   
 0.770
APD08829.1
Sulfur oxidation protein SoxA.
 
   
 0.765
APD08831.1
Sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
 
     0.755
APD08497.1
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
       0.658
APD08498.1
Hypothetical protein.
       0.658
APD08826.1
Sulfide dehydrogenase flavocytochrome C.
  
   
 0.638
APD09150.1
Hypothetical protein.
  
     0.502
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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