STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD08873.1Acetoin dehydrogenase; Belongs to the peptidase M50B family. (363 aa)    
Predicted Functional Partners:
ribBA
Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.616
APD08874.1
Alkanesulfonate transporter substrate-binding subunit.
       0.603
nifJ
Pyruvate-flavodoxin oxidoreductase.
   
   0.601
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.598
APD08872.1
Integral membrane efflux protein.
       0.554
afr
1,5-anhydro-D-fructose reductase.
  
  
 0.493
APD08247.1
DNA polymerase beta family protein.
 
    0.490
APD08875.1
DctM-like transporter.
       0.467
APD09998.1
Hypothetical protein.
 
     0.449
APD08432.1
Cation-transporting ATPase.
 
    0.443
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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