STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD08895.1ABC transporter permease. (339 aa)    
Predicted Functional Partners:
APD08894.1
Peptide ABC transporter permease.
 
0.999
APD09072.1
Peptide ABC transporter permease.
 
 0.994
APD09964.1
Peptide ABC transporter permease.
 
 0.990
APD09966.1
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.989
APD09967.1
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.988
APD09963.1
Peptide ABC transporter substrate-binding protein.
 
 0.983
APD09073.1
Peptide ABC transporter substrate-binding protein.
 
 0.971
APD08893.1
Peptide ABC transporter substrate-binding protein.
 
 0.960
APD09965.1
Peptide ABC transporter permease.
  
  
 
0.920
APD09071.1
Peptide ABC transporter permease.
  
  
 
0.918
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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