STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD08970.1Cytochrome C assembly protein-like protein. (250 aa)    
Predicted Functional Partners:
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
       0.797
APD08622.1
Nitrate reductase delta subunit.
  
     0.714
APD09766.1
Tetratricopeptide repeat protein.
  
     0.709
APD08972.1
Uroporphyrinogen III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
 
     0.704
APD09347.1
Peptidase family M28.
  
     0.702
moaR1
Transcriptional regulatory protein MoaR1.
  
     0.672
APD08973.1
Gamma-carboxymuconolactone decarboxylase.
       0.634
APD08974.1
Hydrolase.
       0.634
APD08965.1
Hypothetical protein.
       0.586
APD08966.1
Hypothetical protein.
       0.586
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.