STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD09038.1Alpha-dextran endo-1,6-alpha-glucosidase; Belongs to the glycosyl hydrolase 57 family. (518 aa)    
Predicted Functional Partners:
APD10104.1
Alpha-glucan phosphorylase.
 
  
 0.936
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 
 0.912
APD09600.1
(neo)pullulanase.
     
 0.907
APD09619.1
(neo)pullulanase.
     
 0.907
lysZ
Acetylglutamate/acetylaminoadipate kinase; Catalyzes the phosphorylation of LysW-gamma-alpha- aminoadipate; Belongs to the acetylglutamate kinase family. LysZ subfamily.
       0.773
argC_1
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of [LysW]- aminoadipate 6-phosphate to yield [LysW]-aminoadipate 6-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily.
       0.768
APD09041.1
Lysine biosynthesis protein LysX; Belongs to the RimK family.
       0.768
APD09037.1
Carbon-nitrogen hydrolase family protein.
       0.741
lysW
Alpha-aminoadipate carrier protein LysW.
       0.611
APD09043.1
CSL zinc finger.
       0.611
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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