STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csoRCopper-sensing transcriptional repressor CsoR. (93 aa)    
Predicted Functional Partners:
dnaX
DNA polymerase III holoenzyme subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
     
 0.830
APD09159.1
Hypothetical protein.
       0.773
mca
Mycothiol S-conjugate amidase.
      
 0.650
APD09160.1
2-oxoacid--ferredoxin oxidoreductase subunit alpha.
       0.576
APD09161.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
       0.576
argB
N-acetylglutamate kinase ArgB-2; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.568
APD09156.1
Hypothetical protein.
       0.568
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.