Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APD09371.1 | APD09376.1 | A0O31_01234 | A0O31_01239 | 3-dehydroquinate synthase. | Competence protein PilO. | 0.638 |
| APD09371.1 | APD09377.1 | A0O31_01234 | A0O31_01240 | 3-dehydroquinate synthase. | Competence protein PilN. | 0.656 |
| APD09371.1 | APD09378.1 | A0O31_01234 | A0O31_01241 | 3-dehydroquinate synthase. | Competence protein PilM. | 0.638 |
| APD09371.1 | APD09525.1 | A0O31_01234 | A0O31_01404 | 3-dehydroquinate synthase. | Bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase. | 0.991 |
| APD09371.1 | APD09817.1 | A0O31_01234 | A0O31_01717 | 3-dehydroquinate synthase. | Prephenate dehydrogenase. | 0.751 |
| APD09371.1 | aroA | A0O31_01234 | A0O31_00531 | 3-dehydroquinate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.983 |
| APD09371.1 | aroC | A0O31_01234 | A0O31_01236 | 3-dehydroquinate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.997 |
| APD09371.1 | aroE | A0O31_01234 | A0O31_00236 | 3-dehydroquinate synthase. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.979 |
| APD09371.1 | aroK | A0O31_01234 | A0O31_01235 | 3-dehydroquinate synthase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.999 |
| APD09371.1 | aroQ | A0O31_01234 | A0O31_00718 | 3-dehydroquinate synthase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.985 |
| APD09376.1 | APD09371.1 | A0O31_01239 | A0O31_01234 | Competence protein PilO. | 3-dehydroquinate synthase. | 0.638 |
| APD09376.1 | APD09377.1 | A0O31_01239 | A0O31_01240 | Competence protein PilO. | Competence protein PilN. | 0.986 |
| APD09376.1 | APD09378.1 | A0O31_01239 | A0O31_01241 | Competence protein PilO. | Competence protein PilM. | 0.941 |
| APD09376.1 | aroC | A0O31_01239 | A0O31_01236 | Competence protein PilO. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.684 |
| APD09376.1 | aroK | A0O31_01239 | A0O31_01235 | Competence protein PilO. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.638 |
| APD09377.1 | APD09371.1 | A0O31_01240 | A0O31_01234 | Competence protein PilN. | 3-dehydroquinate synthase. | 0.656 |
| APD09377.1 | APD09376.1 | A0O31_01240 | A0O31_01239 | Competence protein PilN. | Competence protein PilO. | 0.986 |
| APD09377.1 | APD09378.1 | A0O31_01240 | A0O31_01241 | Competence protein PilN. | Competence protein PilM. | 0.994 |
| APD09377.1 | aroC | A0O31_01240 | A0O31_01236 | Competence protein PilN. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.705 |
| APD09377.1 | aroK | A0O31_01240 | A0O31_01235 | Competence protein PilN. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.638 |
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