STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD09688.1Anaphase-promoting complex, cyclosome, subunit 3. (451 aa)    
Predicted Functional Partners:
APD08814.1
Cytochrome C family protein.
 
 
 0.810
APD08782.1
Hypothetical protein.
 
 
 0.788
APD09110.1
S-layer P100 protein.
 
 
 0.787
APD08688.1
Hypothetical protein.
  
     0.774
APD10027.1
Hypothetical protein.
 
   
 0.770
APD08682.1
Outer membrane protein (OmpH-like).
  
     0.768
APD09224.1
Peptidyl-prolyl cis-trans isomerase.
 
 
   0.763
atpC
V-type ATP synthase subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
     0.758
APD09013.1
Branched-chain alpha-keto acid dehydrogenase subunit E2.
  
     0.751
bamA
Outer membrane protein assembly factor BamA.
  
   
 0.748
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.