STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD09766.1Tetratricopeptide repeat protein. (633 aa)    
Predicted Functional Partners:
APD09767.1
UDP-N-acetyl-D-mannosaminuronic acid transferase; Belongs to the glycosyltransferase 26 family.
       0.773
APD09768.1
2-phosphosulfolactate phosphatase.
       0.773
moaR1
Transcriptional regulatory protein MoaR1.
  
     0.759
APD09840.1
Calcium/calmodulin dependent protein kinase II Association.
  
     0.754
APD09347.1
Peptidase family M28.
  
     0.735
APD08970.1
Cytochrome C assembly protein-like protein.
  
     0.709
APD09189.1
Hypothetical protein.
  
     0.709
APD09602.1
Tetratricopeptide repeat protein.
 
   
 0.644
thiL
Thiamin-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
 
     0.641
APD09234.1
ATP-dependent DNA helicase RecG.
  
    0.640
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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