STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD09842.1Hypothetical protein. (45 aa)    
Predicted Functional Partners:
APD09840.1
Calcium/calmodulin dependent protein kinase II Association.
       0.773
APD09841.1
methylmalonyl-CoA mutase.
       0.773
hxlR
HTH-type transcriptional activator HxlR.
       0.554
APD09844.1
Septum site-determining protein MinD.
       0.554
APD09845.1
Cell division inhibitor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
       0.554
rodA
Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
       0.553
APD09847.1
Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.517
APD09848.1
Spermidine/putrescine ABC transporter permease.
       0.517
APD09849.1
Spermidine/putrescine ABC transporter permease.
       0.517
potD
Spermidine/putrescine-binding periplasmic protein.
       0.517
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.