STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD09885.1ABC transporter permease. (318 aa)    
Predicted Functional Partners:
APD09886.1
ABC transporter ATP-binding protein.
 
 0.983
APD09887.1
NPCBM-associated, NEW3 domain of alpha-galactosidase.
 
    0.953
APD09010.1
ABC transporter ATP-binding protein.
 
 0.722
APD09274.1
ABC transporter ATP-binding protein.
 
 0.701
APD08667.1
Sodium ABC transporter ATP-binding protein NatA.
 
 0.696
APD09315.1
Sodium ABC transporter ATP-binding protein NatA.
 
 0.684
APD09025.1
ABC transporter ATP-binding protein.
 
 
 0.641
APD09026.1
Hypothetical protein.
  
 
 0.641
APD09888.1
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
       0.545
APD09675.1
Carbohydrate deacetylase.
  
     0.503
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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