STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD10173.1LexA repressor. (225 aa)    
Predicted Functional Partners:
APD09626.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
   
  
 0.674
APD10175.1
Integrase core domain protein.
  
    0.567
APD10174.1
Helix-turn-helix protein.
       0.555
APD10176.1
Hypothetical protein.
       0.554
APD10177.1
Hypothetical protein.
       0.544
APD10178.1
Hypothetical protein.
       0.544
APD10179.1
Hypothetical protein.
       0.544
APD10180.1
Hypothetical protein.
       0.544
APD10181.1
Hypothetical protein.
       0.544
APD10182.1
Hypothetical protein.
       0.544
Your Current Organism:
Thermus brockianus
NCBI taxonomy Id: 56956
Other names: JCM 11602, NCIB 12676, NCIB:12676, NCIMB 12676, T. brockianus, strain YS38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.