Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APD08982.1 | clcA | A0O31_00803 | A0O31_02225 | Sodium-alanine symporter family protein. | H(+)/Cl(-) exchange transporter ClcA. | 0.452 |
APD10264.1 | APD10265.1 | A0O31_02226 | A0O31_02227 | Amidohydrolase. | Hypothetical protein. | 0.773 |
APD10264.1 | APD10267.1 | A0O31_02226 | A0O31_02229 | Amidohydrolase. | seryl-tRNA synthetase. | 0.775 |
APD10264.1 | clcA | A0O31_02226 | A0O31_02225 | Amidohydrolase. | H(+)/Cl(-) exchange transporter ClcA. | 0.815 |
APD10264.1 | gatC | A0O31_02226 | A0O31_02230 | Amidohydrolase. | aspartyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.773 |
APD10264.1 | menC | A0O31_02226 | A0O31_02228 | Amidohydrolase. | N-acylamino acid racemase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.775 |
APD10264.1 | mnmC_2 | A0O31_02226 | A0O31_02232 | Amidohydrolase. | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC. | 0.564 |
APD10264.1 | ydfK | A0O31_02226 | A0O31_02231 | Amidohydrolase. | Putative membrane protein YdfK. | 0.768 |
APD10265.1 | APD10264.1 | A0O31_02227 | A0O31_02226 | Hypothetical protein. | Amidohydrolase. | 0.773 |
APD10265.1 | APD10267.1 | A0O31_02227 | A0O31_02229 | Hypothetical protein. | seryl-tRNA synthetase. | 0.773 |
APD10265.1 | clcA | A0O31_02227 | A0O31_02225 | Hypothetical protein. | H(+)/Cl(-) exchange transporter ClcA. | 0.773 |
APD10265.1 | gatC | A0O31_02227 | A0O31_02230 | Hypothetical protein. | aspartyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.773 |
APD10265.1 | menC | A0O31_02227 | A0O31_02228 | Hypothetical protein. | N-acylamino acid racemase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.983 |
APD10265.1 | mnmC_2 | A0O31_02227 | A0O31_02232 | Hypothetical protein. | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC. | 0.564 |
APD10265.1 | ydfK | A0O31_02227 | A0O31_02231 | Hypothetical protein. | Putative membrane protein YdfK. | 0.768 |
APD10267.1 | APD10264.1 | A0O31_02229 | A0O31_02226 | seryl-tRNA synthetase. | Amidohydrolase. | 0.775 |
APD10267.1 | APD10265.1 | A0O31_02229 | A0O31_02227 | seryl-tRNA synthetase. | Hypothetical protein. | 0.773 |
APD10267.1 | clcA | A0O31_02229 | A0O31_02225 | seryl-tRNA synthetase. | H(+)/Cl(-) exchange transporter ClcA. | 0.775 |
APD10267.1 | gatC | A0O31_02229 | A0O31_02230 | seryl-tRNA synthetase. | aspartyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.826 |
APD10267.1 | menC | A0O31_02229 | A0O31_02228 | seryl-tRNA synthetase. | N-acylamino acid racemase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.773 |
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