Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yfdHGlycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)    
Predicted Functional Partners:
KIX90269.1
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.765
KIX90268.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.739
KIX90270.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.737
KIX91310.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.726
KIX91329.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.721
KIX91311.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.720
ytfL
Transporter associated domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.695
KIX90458.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.469
kfoC_2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.431
tagH_1
Teichoic acids export protein ATP-binding subunit; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
 
    0.421
Your Current Organism:
Staphylococcus microti
NCBI taxonomy Id: 569857
Other names: CCM 4903, CCUG 55861, DSM 22147, NCTC 13832, S. microti, Staphylococcus microti Novakova et al. 2010, Staphylococcus sp. CCM 4903, Staphylococcus sp. CCM 4904, strain 4005-LJ(m)
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