STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecsAMultidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)    
Predicted Functional Partners:
KIX91433.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.963
hit
Cell-cycle regulation protein HIT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.836
KIX90494.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.778
prsD
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.691
KIX91404.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.670
mdlB
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.607
KIX91406.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.582
KIX91609.1
Zinc metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.462
atpC
ATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.459
cysS
cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.449
Your Current Organism:
Staphylococcus microti
NCBI taxonomy Id: 569857
Other names: CCM 4903, CCUG 55861, DSM 22147, NCTC 13832, S. microti, Staphylococcus microti Novakova et al. 2010, Staphylococcus sp. CCM 4903, Staphylococcus sp. CCM 4904, strain 4005-LJ(m)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.