STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIX91318.1Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
KIX91330.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.992
murR
Sialic acid utilization regulator, RpiR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.703
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
    
  0.698
folE2
GTP cyclohydrolase; Converts GTP to 7,8-dihydroneopterin triphosphate.
       0.694
bshC
Hypothetical protein; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.
 
   
 0.637
KIX91049.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.566
KIX90556.1
Hypothetical protein; Similar to 2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 2H phosphoesterase superfamily. YjcG family.
  
     0.546
putA
Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.535
KIX90725.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.481
glcB
PTS glucose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.427
Your Current Organism:
Staphylococcus microti
NCBI taxonomy Id: 569857
Other names: CCM 4903, CCUG 55861, DSM 22147, NCTC 13832, S. microti, Staphylococcus microti Novakova et al. 2010, Staphylococcus sp. CCM 4903, Staphylococcus sp. CCM 4904, strain 4005-LJ(m)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.