STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIX91225.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (148 aa)    
Predicted Functional Partners:
swrC
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.792
KIX90715.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.769
KIX90420.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.769
macB_1
Hemin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.624
macB_2
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.624
KIX91646.1
Cadmium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.447
lolD_4
Hemin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.431
lolD_1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.431
lolD_3
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.431
vraD
Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.431
Your Current Organism:
Staphylococcus microti
NCBI taxonomy Id: 569857
Other names: CCM 4903, CCUG 55861, DSM 22147, NCTC 13832, S. microti, Staphylococcus microti Novakova et al. 2010, Staphylococcus sp. CCM 4903, Staphylococcus sp. CCM 4904, strain 4005-LJ(m)
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.