STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
odhOctopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (358 aa)    
Predicted Functional Partners:
KIX91134.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.682
KIX90324.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.621
KIX91136.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.611
KIX91124.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.539
engA
GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
  
 0.522
KIX89803.1
Dynamin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.522
KIX91837.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.516
dinG
ATP-dependent helicase; 3'-5' exonuclease.
  
    0.462
lgt
Diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
    0.459
rluD_3
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.454
Your Current Organism:
Staphylococcus microti
NCBI taxonomy Id: 569857
Other names: CCM 4903, CCUG 55861, DSM 22147, NCTC 13832, S. microti, Staphylococcus microti Novakova et al. 2010, Staphylococcus sp. CCM 4903, Staphylococcus sp. CCM 4904, strain 4005-LJ(m)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.