Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO00958.1 | SEO00987.1 | SAMN04490248_10114 | SAMN04490248_10115 | Permease of the drug/metabolite transporter (DMT) superfamily. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.775 |
SEO00958.1 | SEP07844.1 | SAMN04490248_10114 | SAMN04490248_12321 | Permease of the drug/metabolite transporter (DMT) superfamily. | Response regulator receiver domain-containing protein. | 0.505 |
SEO00958.1 | SEP13921.1 | SAMN04490248_10114 | SAMN04490248_12838 | Permease of the drug/metabolite transporter (DMT) superfamily. | Predicted arabinose efflux permease, MFS family. | 0.418 |
SEO00958.1 | azoR | SAMN04490248_10114 | SAMN04490248_10116 | Permease of the drug/metabolite transporter (DMT) superfamily. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.577 |
SEO00987.1 | SEO00958.1 | SAMN04490248_10115 | SAMN04490248_10114 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.775 |
SEO00987.1 | azoR | SAMN04490248_10115 | SAMN04490248_10116 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.540 |
SEP07844.1 | SEO00958.1 | SAMN04490248_12321 | SAMN04490248_10114 | Response regulator receiver domain-containing protein. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.505 |
SEP13921.1 | SEO00958.1 | SAMN04490248_12838 | SAMN04490248_10114 | Predicted arabinose efflux permease, MFS family. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.418 |
azoR | SEO00958.1 | SAMN04490248_10116 | SAMN04490248_10114 | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.577 |
azoR | SEO00987.1 | SAMN04490248_10116 | SAMN04490248_10115 | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.540 |