STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO04591.1Leucyl aminopeptidase; Belongs to the peptidase M17 family. (458 aa)    
Predicted Functional Partners:
SEO33905.1
Aminopeptidase N.
  
 0.895
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
  
 
 0.889
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
  
 
0.874
SEP06242.1
Aromatic amino acid aminotransferase apoenzyme.
   
 0.872
SEO04572.1
Cell wall-associated hydrolase, NlpC family.
       0.856
SEO57003.1
Cystathione beta-lyase.
  
 
  0.839
SEP05886.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
  
  
 0.836
SEO66951.1
Cysteine synthase A.
    
 0.759
SEO88912.1
Cysteine synthase A.
    
 0.759
SEO18093.1
Arginine:pyruvate transaminase.
   
  0.753
Your Current Organism:
Salinihabitans flavidus
NCBI taxonomy Id: 569882
Other names: CCUG 56758, DSM 27842, KCTC 22485, Rhodobacteraceae bacterium ISL-46, S. flavidus, Salinihabitans flavidus Yoon et al. 2009, strain ISL-46
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