Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO04572.1 | SEO04591.1 | SAMN04490248_101145 | SAMN04490248_101146 | Cell wall-associated hydrolase, NlpC family. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.856 |
SEO04591.1 | SEO04572.1 | SAMN04490248_101146 | SAMN04490248_101145 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Cell wall-associated hydrolase, NlpC family. | 0.856 |
SEO04591.1 | SEO18093.1 | SAMN04490248_101146 | SAMN04490248_102141 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Arginine:pyruvate transaminase. | 0.753 |
SEO04591.1 | SEO33905.1 | SAMN04490248_101146 | SAMN04490248_10434 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Aminopeptidase N. | 0.895 |
SEO04591.1 | SEO57003.1 | SAMN04490248_101146 | SAMN04490248_10722 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Cystathione beta-lyase. | 0.839 |
SEO04591.1 | SEO66951.1 | SAMN04490248_101146 | SAMN04490248_10918 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Cysteine synthase A. | 0.759 |
SEO04591.1 | SEO88912.1 | SAMN04490248_101146 | SAMN04490248_11527 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Cysteine synthase A. | 0.759 |
SEO04591.1 | SEP05886.1 | SAMN04490248_101146 | SAMN04490248_1224 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Gamma-glutamyltranspeptidase / glutathione hydrolase. | 0.836 |
SEO04591.1 | SEP06242.1 | SAMN04490248_101146 | SAMN04490248_12218 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Aromatic amino acid aminotransferase apoenzyme. | 0.872 |
SEO04591.1 | gshB | SAMN04490248_101146 | SAMN04490248_10187 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.889 |
SEO04591.1 | pepA | SAMN04490248_101146 | SAMN04490248_10972 | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.874 |
SEO18093.1 | SEO04591.1 | SAMN04490248_102141 | SAMN04490248_101146 | Arginine:pyruvate transaminase. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.753 |
SEO18093.1 | SEO33905.1 | SAMN04490248_102141 | SAMN04490248_10434 | Arginine:pyruvate transaminase. | Aminopeptidase N. | 0.734 |
SEO18093.1 | SEO57003.1 | SAMN04490248_102141 | SAMN04490248_10722 | Arginine:pyruvate transaminase. | Cystathione beta-lyase. | 0.793 |
SEO18093.1 | SEO66951.1 | SAMN04490248_102141 | SAMN04490248_10918 | Arginine:pyruvate transaminase. | Cysteine synthase A. | 0.664 |
SEO18093.1 | SEO88912.1 | SAMN04490248_102141 | SAMN04490248_11527 | Arginine:pyruvate transaminase. | Cysteine synthase A. | 0.664 |
SEO18093.1 | SEP06242.1 | SAMN04490248_102141 | SAMN04490248_12218 | Arginine:pyruvate transaminase. | Aromatic amino acid aminotransferase apoenzyme. | 0.772 |
SEO18093.1 | pepA | SAMN04490248_102141 | SAMN04490248_10972 | Arginine:pyruvate transaminase. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.753 |
SEO33905.1 | SEO04591.1 | SAMN04490248_10434 | SAMN04490248_101146 | Aminopeptidase N. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.895 |
SEO33905.1 | SEO18093.1 | SAMN04490248_10434 | SAMN04490248_102141 | Aminopeptidase N. | Arginine:pyruvate transaminase. | 0.734 |
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