Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO19678.1 | SEO19700.1 | SAMN04490248_102208 | SAMN04490248_102209 | Rod shape-determining protein MreB. | Rod shape-determining protein MreC. | 0.998 |
SEO19678.1 | SEO19723.1 | SAMN04490248_102208 | SAMN04490248_102210 | Rod shape-determining protein MreB. | Rod shape-determining protein MreD. | 0.703 |
SEO19678.1 | SEO19749.1 | SAMN04490248_102208 | SAMN04490248_102211 | Rod shape-determining protein MreB. | Peptidoglycan glycosyltransferase. | 0.975 |
SEO19678.1 | SEO98934.1 | SAMN04490248_102208 | SAMN04490248_11869 | Rod shape-determining protein MreB. | Cell division protein FtsI (penicillin-binding protein 3). | 0.785 |
SEO19678.1 | ftsQ | SAMN04490248_102208 | SAMN04490248_10454 | Rod shape-determining protein MreB. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.448 |
SEO19678.1 | mrdB | SAMN04490248_102208 | SAMN04490248_102212 | Rod shape-determining protein MreB. | Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.972 |
SEO19678.1 | murA | SAMN04490248_102208 | SAMN04490248_11641 | Rod shape-determining protein MreB. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.779 |
SEO19678.1 | murC | SAMN04490248_102208 | SAMN04490248_10459 | Rod shape-determining protein MreB. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.553 |
SEO19678.1 | murD | SAMN04490248_102208 | SAMN04490248_11873 | Rod shape-determining protein MreB. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.489 |
SEO19678.1 | murG | SAMN04490248_102208 | SAMN04490248_10460 | Rod shape-determining protein MreB. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.703 |
SEO19700.1 | SEO19678.1 | SAMN04490248_102209 | SAMN04490248_102208 | Rod shape-determining protein MreC. | Rod shape-determining protein MreB. | 0.998 |
SEO19700.1 | SEO19723.1 | SAMN04490248_102209 | SAMN04490248_102210 | Rod shape-determining protein MreC. | Rod shape-determining protein MreD. | 0.831 |
SEO19700.1 | SEO19749.1 | SAMN04490248_102209 | SAMN04490248_102211 | Rod shape-determining protein MreC. | Peptidoglycan glycosyltransferase. | 0.990 |
SEO19700.1 | SEO98934.1 | SAMN04490248_102209 | SAMN04490248_11869 | Rod shape-determining protein MreC. | Cell division protein FtsI (penicillin-binding protein 3). | 0.880 |
SEO19700.1 | ftsQ | SAMN04490248_102209 | SAMN04490248_10454 | Rod shape-determining protein MreC. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.450 |
SEO19700.1 | mrdB | SAMN04490248_102209 | SAMN04490248_102212 | Rod shape-determining protein MreC. | Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.975 |
SEO19700.1 | murC | SAMN04490248_102209 | SAMN04490248_10459 | Rod shape-determining protein MreC. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.493 |
SEO19700.1 | murD | SAMN04490248_102209 | SAMN04490248_11873 | Rod shape-determining protein MreC. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.490 |
SEO19700.1 | murG | SAMN04490248_102209 | SAMN04490248_10460 | Rod shape-determining protein MreC. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.669 |
SEO19723.1 | SEO19678.1 | SAMN04490248_102210 | SAMN04490248_102208 | Rod shape-determining protein MreD. | Rod shape-determining protein MreB. | 0.703 |
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