Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO10157.1 | SEO10185.1 | SAMN04490248_101351 | SAMN04490248_101352 | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | Chromosome segregation ATPase. | 0.998 |
SEO10157.1 | SEO21128.1 | SAMN04490248_101351 | SAMN04490248_102270 | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | DNA translocase FtsK. | 0.805 |
SEO10157.1 | polA | SAMN04490248_101351 | SAMN04490248_12329 | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.531 |
SEO10185.1 | SEO10157.1 | SAMN04490248_101352 | SAMN04490248_101351 | Chromosome segregation ATPase. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.998 |
SEO10185.1 | SEO21128.1 | SAMN04490248_101352 | SAMN04490248_102270 | Chromosome segregation ATPase. | DNA translocase FtsK. | 0.728 |
SEO21106.1 | SEO21128.1 | SAMN04490248_102269 | SAMN04490248_102270 | Aspartate/methionine/tyrosine aminotransferase. | DNA translocase FtsK. | 0.892 |
SEO21106.1 | SEO21152.1 | SAMN04490248_102269 | SAMN04490248_102271 | Aspartate/methionine/tyrosine aminotransferase. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.819 |
SEO21128.1 | SEO10157.1 | SAMN04490248_102270 | SAMN04490248_101351 | DNA translocase FtsK. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.805 |
SEO21128.1 | SEO10185.1 | SAMN04490248_102270 | SAMN04490248_101352 | DNA translocase FtsK. | Chromosome segregation ATPase. | 0.728 |
SEO21128.1 | SEO21106.1 | SAMN04490248_102270 | SAMN04490248_102269 | DNA translocase FtsK. | Aspartate/methionine/tyrosine aminotransferase. | 0.892 |
SEO21128.1 | SEO21152.1 | SAMN04490248_102270 | SAMN04490248_102271 | DNA translocase FtsK. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.858 |
SEO21128.1 | SEO34646.1 | SAMN04490248_102270 | SAMN04490248_10461 | DNA translocase FtsK. | Cell division protein FtsW; Belongs to the SEDS family. | 0.761 |
SEO21128.1 | SEO98934.1 | SAMN04490248_102270 | SAMN04490248_11869 | DNA translocase FtsK. | Cell division protein FtsI (penicillin-binding protein 3). | 0.741 |
SEO21128.1 | SEP09472.1 | SAMN04490248_102270 | SAMN04490248_12434 | DNA translocase FtsK. | Regulatory P domain of the subtilisin-like proprotein convertase. | 0.723 |
SEO21128.1 | ftsQ | SAMN04490248_102270 | SAMN04490248_10454 | DNA translocase FtsK. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.916 |
SEO21128.1 | polA | SAMN04490248_102270 | SAMN04490248_12329 | DNA translocase FtsK. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.725 |
SEO21128.1 | rpoC | SAMN04490248_102270 | SAMN04490248_1117 | DNA translocase FtsK. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.789 |
SEO21152.1 | SEO21106.1 | SAMN04490248_102271 | SAMN04490248_102269 | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Aspartate/methionine/tyrosine aminotransferase. | 0.819 |
SEO21152.1 | SEO21128.1 | SAMN04490248_102271 | SAMN04490248_102270 | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DNA translocase FtsK. | 0.858 |
SEO34646.1 | SEO21128.1 | SAMN04490248_10461 | SAMN04490248_102270 | Cell division protein FtsW; Belongs to the SEDS family. | DNA translocase FtsK. | 0.761 |
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