Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO18411.1 | SEO29229.1 | SAMN04490248_102155 | SAMN04490248_103191 | Arsenate reductase. | Predicted dithiol-disulfide isomerase, DsbA family. | 0.879 |
SEO29190.1 | SEO29210.1 | SAMN04490248_103189 | SAMN04490248_103190 | Transcriptional regulator, contains XRE-family HTH domain. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.680 |
SEO29190.1 | SEO29229.1 | SAMN04490248_103189 | SAMN04490248_103191 | Transcriptional regulator, contains XRE-family HTH domain. | Predicted dithiol-disulfide isomerase, DsbA family. | 0.648 |
SEO29190.1 | SEO29251.1 | SAMN04490248_103189 | SAMN04490248_103192 | Transcriptional regulator, contains XRE-family HTH domain. | Ion channel. | 0.558 |
SEO29190.1 | SEO29275.1 | SAMN04490248_103189 | SAMN04490248_103193 | Transcriptional regulator, contains XRE-family HTH domain. | MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein. | 0.556 |
SEO29190.1 | SEO29297.1 | SAMN04490248_103189 | SAMN04490248_103194 | Transcriptional regulator, contains XRE-family HTH domain. | Hypothetical protein. | 0.425 |
SEO29210.1 | SEO29190.1 | SAMN04490248_103190 | SAMN04490248_103189 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Transcriptional regulator, contains XRE-family HTH domain. | 0.680 |
SEO29210.1 | SEO29229.1 | SAMN04490248_103190 | SAMN04490248_103191 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Predicted dithiol-disulfide isomerase, DsbA family. | 0.821 |
SEO29210.1 | SEO29251.1 | SAMN04490248_103190 | SAMN04490248_103192 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Ion channel. | 0.787 |
SEO29210.1 | SEO29275.1 | SAMN04490248_103190 | SAMN04490248_103193 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein. | 0.783 |
SEO29210.1 | SEO29297.1 | SAMN04490248_103190 | SAMN04490248_103194 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Hypothetical protein. | 0.576 |
SEO29229.1 | SEO18411.1 | SAMN04490248_103191 | SAMN04490248_102155 | Predicted dithiol-disulfide isomerase, DsbA family. | Arsenate reductase. | 0.879 |
SEO29229.1 | SEO29190.1 | SAMN04490248_103191 | SAMN04490248_103189 | Predicted dithiol-disulfide isomerase, DsbA family. | Transcriptional regulator, contains XRE-family HTH domain. | 0.648 |
SEO29229.1 | SEO29210.1 | SAMN04490248_103191 | SAMN04490248_103190 | Predicted dithiol-disulfide isomerase, DsbA family. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.821 |
SEO29229.1 | SEO29251.1 | SAMN04490248_103191 | SAMN04490248_103192 | Predicted dithiol-disulfide isomerase, DsbA family. | Ion channel. | 0.809 |
SEO29229.1 | SEO29275.1 | SAMN04490248_103191 | SAMN04490248_103193 | Predicted dithiol-disulfide isomerase, DsbA family. | MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein. | 0.799 |
SEO29229.1 | SEO29297.1 | SAMN04490248_103191 | SAMN04490248_103194 | Predicted dithiol-disulfide isomerase, DsbA family. | Hypothetical protein. | 0.576 |
SEO29229.1 | SEO62691.1 | SAMN04490248_103191 | SAMN04490248_10839 | Predicted dithiol-disulfide isomerase, DsbA family. | Arsenate reductase; Belongs to the ArsC family. | 0.879 |
SEO29229.1 | SEO70869.1 | SAMN04490248_103191 | SAMN04490248_11019 | Predicted dithiol-disulfide isomerase, DsbA family. | NAD(P)H-dependent FMN reductase. | 0.512 |
SEO29251.1 | SEO29190.1 | SAMN04490248_103192 | SAMN04490248_103189 | Ion channel. | Transcriptional regulator, contains XRE-family HTH domain. | 0.558 |
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