Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO02685.1 | SEO29991.1 | SAMN04490248_10179 | SAMN04490248_103225 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). | 0.799 |
SEO02685.1 | SEO30034.1 | SAMN04490248_10179 | SAMN04490248_103227 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Sulfur carrier protein. | 0.979 |
SEO02685.1 | SEO30076.1 | SAMN04490248_10179 | SAMN04490248_103229 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Hydroxymethylpyrimidine kinase. | 0.679 |
SEO02685.1 | SEO64542.1 | SAMN04490248_10179 | SAMN04490248_108112 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | ThiS family protein. | 0.962 |
SEO02685.1 | SEO77678.1 | SAMN04490248_10179 | SAMN04490248_11213 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Molybdopterin synthase subunit MoaD. | 0.975 |
SEO02685.1 | SEO93424.1 | SAMN04490248_10179 | SAMN04490248_11688 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Haem-NO-binding. | 0.501 |
SEO02685.1 | SEO95876.1 | SAMN04490248_10179 | SAMN04490248_11754 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiamine-phosphate pyrophosphorylase. | 0.631 |
SEO02685.1 | thiG | SAMN04490248_10179 | SAMN04490248_103226 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.961 |
SEO29967.1 | SEO29991.1 | SAMN04490248_103224 | SAMN04490248_103225 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). | 0.990 |
SEO29967.1 | SEO30034.1 | SAMN04490248_103224 | SAMN04490248_103227 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Sulfur carrier protein. | 0.998 |
SEO29967.1 | SEO30055.1 | SAMN04490248_103224 | SAMN04490248_103228 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Glycine oxidase. | 0.939 |
SEO29967.1 | SEO30076.1 | SAMN04490248_103224 | SAMN04490248_103229 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Hydroxymethylpyrimidine kinase. | 0.938 |
SEO29967.1 | SEO64542.1 | SAMN04490248_103224 | SAMN04490248_108112 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | ThiS family protein. | 0.962 |
SEO29967.1 | SEO77678.1 | SAMN04490248_103224 | SAMN04490248_11213 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Molybdopterin synthase subunit MoaD. | 0.975 |
SEO29967.1 | SEO93424.1 | SAMN04490248_103224 | SAMN04490248_11688 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Haem-NO-binding. | 0.501 |
SEO29967.1 | SEO95876.1 | SAMN04490248_103224 | SAMN04490248_11754 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiamine-phosphate pyrophosphorylase. | 0.634 |
SEO29967.1 | thiG | SAMN04490248_103224 | SAMN04490248_103226 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.995 |
SEO29991.1 | SEO02685.1 | SAMN04490248_103225 | SAMN04490248_10179 | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.799 |
SEO29991.1 | SEO29967.1 | SAMN04490248_103225 | SAMN04490248_103224 | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.990 |
SEO29991.1 | SEO30034.1 | SAMN04490248_103225 | SAMN04490248_103227 | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). | Sulfur carrier protein. | 0.995 |
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